Arthur Gilly comments

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                                            Arthur Gilly

Remote builds: Allow external files to be copied to remote

Agree, would be useful.

Import Company Data

Okay. We need a way to automate data transfer though. Is this possible to do via the API? I see the option to enable it, but couldn't find the docs.

Import Company Data

No problem. Mostly we want to emulate a database export/import as described above. That is, read all useful records of departments, employees, types of time off and time off, and...

`statistics` not found, and cannot resume at step "afterdedup"

may be linked to issue #255

`statistics` not found, and cannot resume at step "afterdedup"

Can you confirm which version of the tools I need? Currently, I have `Juicer Tools Version 1.9.9` when I run the `CPU/common/juicer_tools.jar`. I used https://github.com/aidenlab/juicer/wiki/Installation as an install guide. The...

`statistics` not found, and cannot resume at step "afterdedup"

I cloned the github repo but for Juicer. Will try with the release you recommend, however, what you sent me is Juicebox. Did I try to use the wrong software?

`statistics` not found, and cannot resume at step "afterdedup"

All right. Perhaps it would make sense to add this to the Juicer installation wiki, as it currently specifically instructs users to clone the repo, and then download juicer tools...

telseq on cram files

Agreed, it would be very helpful.

WARN: Failed to load spectral decomposition results of the kinship matrix (.xHemi.eigen file is incorrectly reused across independent runs of rvtests)

This is great investigative work @dpanyard !

WARN: Failed to load spectral decomposition results of the kinship matrix (.xHemi.eigen file is incorrectly reused across independent runs of rvtests)

Yes, one of our analysts is trying out RVtests and is having a really hard time understanding what it's doing and working her way through these warnings... For now I...