Aditya P. Apte

Freehand editing of airways

1

I would like to edit the airway segments and recalculate radius and center-line for the edited airways. Current options support adding/erasing predetermined patches based on intensity threshold. Is it possible...

Running in non-interactive mode

1

Thanks for the nice toolkit. Is there documentation to get started on using PTK in batch mode? I would like to run airway segmentation on a bunch of CT scans...

I am using Octave 6.2. %plot natve throws the following error: ``` EOF: End Of File (EOF). searcher: searcher_re: 0: re.compile('PEXPECT_PROMPT>') 1: re.compile('PEXPECT_PROMPT_') 2: re.compile('\\A.+?__stdin_prompt>|debug> ') ```

Thumbnail for small labels

2

## 🚀 Feature Crop labels to exclude background while showing thumbnails in layer list. ## Motivation For radiological images, segmentation of tumor occupies a lot fewer voxels compared to the...

Launching figure with uicontrols from notebook

1

My use case is to display data generated in Jupyter notebook on a figure that allows the of uicontrols. Does the kernel allow to launch a figure window with Octave...

How to specify input/output pairs in /images/list.txt for model training

2

**Task** (what are you trying to do/register?) Train a model from pairs of registered CT images (3D). **What have you tried** I am at data preparation stage in the format...