Adam Talbot
Adam Talbot
### Description of feature Similar to #1180, the output of `sentieon --algo HsMetricAlgo` is not parsed as per `picard CollectHsMetrics`. This is because the output files are slightly different in...
### Is there an existing module for this? - [X] I have searched for the existing module ### Is there an open PR for this? - [X] I have searched...
### Is your feature request related to a problem? Please describe There should be a way of requesting a module update/feature enhancement on here. E.g., module A offers support for...
Additions: - More Azure specific features included in NF-Core config Relates to #401 --- name: Azure about: Add more features to Azure config --- Please follow these steps before submitting...
Source: https://github.com/niu-lab/msisensor2
### Is there an existing module for this? - [X] I have searched for the existing module ### Is there an open PR for this? - [X] I have searched...
### Description of feature The `sync` functionality should support the `template.yml` file similar to the `create` function.
I think this is expected behaviour or there might be a setting but I can't find how to change it. The *.mosdepth.global.region.dist.txt and *.mosdepth.region.dist.txt are missing values between the integers....
## Bug report ### Expected behavior and actual behavior When using [nextflow inspect](https://www.nextflow.io/docs/edge/cli.html#inspect), it does not accept the workdir on the command line (`-w work`) which can be annoying for...
> really go as far as possible in running the pipeline, but then exit 1 at the very end if any errors were ignored. This is a pretty useful feature....