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                                            Alex Bridgland

simtk.openmm.OpenMMException: Particle coordinate is nan

Hi, that's not something I've seen. Is this something you're still seeing, and if so are you able to share the inputs and how you are running AlphaFold? Thanks!

simtk.openmm.OpenMMException: Particle coordinate is nan

Duplicate of #120

Create a docker image

I just tried adding these 3 files to the `/lab` directory and running `docker build -t dmlab .` which all seemed to work fine but when I run `docker run...

Trimming not possible

Hi @polinanvkv, as @meghpal helpfully commented, the notebook you're referring to is not part of this repository so please raise the issue in the external repository if you still need...