Andy Boughton

@Parul-Kudtarkar , here's the debug code we wrote during the call. Essentially, any time any function in any data layer is called, this code writes a message to the console...

Kenneth at the Broad also reports seeing this in some match events. He may add more details to the ticket later.

Although the python version of LocusZoom does not support build 38, we have been working on adding this to our browser-based version (makes plots from your own tabixed GWAS data)....

Thanks for your question. First, the fancy answer to your question: if you're comfortable running the infrastructure, then the code to calculate custom LD is open source and you can...

> What needs to happen to merge this? Update to 14.0 (no beta) and test? Hi Peter! In general the branch changes should work well, but I didn't exhaustively test...

UM fork will be piloting `maxActive = -1` in our next fork release, with server performance metrics to evaluate realistic load.

One more for the list. I have no idea what is causing this one, since failed files are deleted from the server. The entire error message is quite literally just...

A user recently submitted haploid data, which cause eagle to fail during the phasing step. There was no user or system facing error; we were only able to diagnose this...

A user job failed during the QC step with following error in the private admin-only logs: > Quitting from lines 5-16 (qc-report.Rmd) > Error in read.table(input, header = FALSE, sep...

Thanks for the note! It's relatively rare to see problems, but when I have, they were usually either: * Slight variations in the specified format matter (tabix isn't always very...