Abolfazl (Abe)
Abolfazl (Abe)
https://github.com/mims-harvard/TDC/issues/314#issuecomment-2396435932
Cool! Looking forward to this. I would like to use it in https://github.com/GilbertLabUCSF/CanDI. ___ cc @Yogiski
> > Hi, > > I was wondering if this will be implemented soon? I have done all my analysis in Python but was asked for some interaction terms and...
Here is a quick try on my data: ```python build_design_matrix( metadata=rnaseq_data_wt.obs, design_factors = '`Treatment`+`Time`+`Treatment:Time`', ref_level=[('Treatment','DMSO'),('Time','8hr')] ) ``` I'm trying to have "Treatment" and "Time" as co-variables but I ran into...
@jeandut hello and happy new year! is this getting back in radar?
> > @jeandut hello and happy new year! is this getting back in radar? > > > > @abearab Interaction terms were implemented in https://github.com/owkin/PyDESeq2/pull/328 and are now available as...
@tshauck – hi there I just made some progress in this PR https://github.com/ArcInstitute/ScreenPro2/pull/40. You may see my codes in `cas12` module which could be improved. Currently my code depends on...
Hi @tshauck – I found [this](https://www.drive5.com/usearch/manual7/merge_pair.html) cartoon and it may give you a better sense for merging read pairs.  ___ I think your `merge_paired_end_reads` need to use one of...
@tshauck have you seen https://github.com/BiocPy?