Abby Williams

I am trying to understand how dadi_pipeline selects the best run and whether this is an issue for my data. I have created a genome-wide SFS using ANGSD realSFS and...

When running Dsuite Dtrios -g: Assertion `p_S3a >= 0' failed.

1

I am running Dsuite Dtrios in genotype probability mode with the following command: ``` Dsuite Dtrios \ ${VCF_DIR}/combined.cleaned.v2.vcf.gz \ -o ${OUT_DIR}/results \ -g --ABBAclustering \ SETS.txt ``` However, I am...

[dwgsim_core] failed to generate a read after 10001 trials

1

I'm struggling to understand the error messaging from dwgsim. I'm trying to generate reads of ~4X coverage from a [bird genome](https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_007252995.1/) and have gotten this error message: `[dwgsim_core] failed to...