Yijia (Alva) Jiang comments

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                                            Yijia (Alva) Jiang

Error in paramSweep_v3(scRNA_r, PCs = 1:30, sct = FALSE) : could not find function "paramSweep_v3"

Hi, I met the same error, could you share the script you used for seurat v5? Thank you very much!

Subscript out of bounds - Running parameter sweep

I encountered the similar issue

Script for doublet finder with seurat 5

Hi, I am facing the same issue, could you let me know which version did you use? Thank you so much!

Script for doublet finder with seurat 5

@synatkeamsk Thank you very much for such a quick response! I am using the exact same version, but got an error when running paramSweep function, and the error shows "Error...

Unable to load visium HD data using seurat

@zskylarli I sent you the files. Thank you very much!

A problem with a error message in identifyOverExpressedGenes in CellChat.

I cannot run identifyOverExpressedGenes function, so I run manually and get error: Error in (function (cl, name, valueClass) : assignment of an object of class “character” is not valid for...