YPGG1234

Results 9 comments of YPGG1234

Question about the confident scores

Hi, this contig's grouping confidence score is 0.9568822757353695.

Question about the confident scores

Thanks for your help, I will try it. This contig length is longer than 5Mb, but be broken at position 236K. And the first part is placed on chr13 ,second...

Question about the confident scores

Ok, I understand. Thanks for your answer !

Question about the confident scores

Hi malonge, Recently I meet some new problems.When I used assembly‘s scaffolds and reference genome to draw CIRCOS,It looks pretty,but when I used Ragoo assembly and reference to draw CIRCOS....

Question about the confident scores

OK, link.txt is an input file required by CIRCOS to draw collinearity graph.It records the collinearity relation between assembly and reference, and the format is as follows: `QueryChr/ScaffoldName QueryChr/ScaffoldStart QueryChr/ScaffoldEnd...

Question about the confident scores

My **contigs_against_ref.paf.log** contain this minimap2 command: `minimap2 -k19 -w19 -t24 ref.fa assembly.fa` So my minimap2 command is : `minimap2 -k19 -w19 -t 24 --secondary=no -cx asm10 ref.fa assembly.fa` I think...

Question about the confident scores

I wonder if I can modify the RaGOO's built-in minimap2 parameter, where should I change it? Such as I want to change built-in "**minimap2 -k19 -w19 -t24 ref.fa assembly.fa**" to...

Question about the confident scores

Ok, I will try it, thank you.

[BUG] Windows version cannot use GoTo option

@egoltsman I'm sorry, I still haven't been able to solve the problem.