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``` (funannotate) [root@localhost funannotate]# funannotate predict -i ../data/genomes.fasta -o fun -s "th" --rna_bam ../data/rnaalign.bam --protein_evidence ../data/all.pep.fasta --transcript_evidence ../data/Trinity.fasta --cpus 8 ------------------------------------------------------- [Jan 06 09:38 PM]: OS: CentOS Linux 7, 8...
I solve the problem by recreating the rna-bam file with hisat2.