Xueliang24
Xueliang24
@reslp Could you also help me to solve it
> Which funannotate image are you using @Xueliang24? The one I created does not include eggnog mapper or GeneMark so @hyphaltip is correct. However I don't think that this would...
> Sounds like eggnog mapper isn’t installed in this image? Also genemark but that shouldn’t be fatal. They don't affect the running of funannotate clean, sort, mask and predict.
> @Xueliang24 , maybe try adding some more specific `output` to your `predict` rule (because that output folder will also be created by other rules); that specific output you should...
where can I know more option about ncbitax2lin The help information is simple
> Feel free to send a pull request. You may add an option like `--output=tax_id`. I used the option `--output=tax_id`, it just changed the name of output file to "tax_id"
> If it's possible to have lineage tax id instead of full name ? > > ``` > taxid kindom phylum class order family genus species > 11138 10239 2732408...
> ncbitax2lin currently can only generate lineage info. Not sure about protein IDs. Or could you tell me how to realize the FAQ？Just like `ncbitax2lin ncr_accession2taxid names.dmp`.I would like to...
大佬，发现R在读取时，如果列明为数字开头会自动加上x