Tao Zeng
Tao Zeng
need Chinese pretrain model, please!
It stores training raw image and labels as 3d image stack so that network can randomly get training patches from the image stack. following is a Matlab code example for...
it is generated from segmentation label by another matlab code. which I can't find it now, but I will send it to later tomorrow On Tue, Apr 11, 2017 at...
gt_labels=h5read('../hd5/train_labelEM.h5','/label'); bw_labels=h5read('../data/snemi3d_train_full_stacks_label100.h5','/label'); gt_labels=permute( gt_labels, [2 3 1]); bw_labels=permute( bw_labels, [2 3 1]); fun =@my_border_labeling new_labels_1 =zeros(size(gt_labels)); new_labels_2 =zeros(size(gt_labels)); parfor i=1:1024 gt_2d=squeeze(gt_labels(i,:,:)); new_labels_1_1(i,:,:) = nlfilter(gt_2d,[1 3],fun); new_labels_1_2(i,:,:) = nlfilter(gt_2d,[3 1],fun); end...
you can download "snemi3d_train_full_stacks_label100.h5" file from: https://www.dropbox.com/s/7ceaqcznzyd31l6/snemi3d_train_full_stacks_label100.h5?dl=0
v# files(v1,v2...v15) are generated from "augment_data.m" code
train-label2d_widen contain widened boundary label it can be downloaded from here: https://www.dropbox.com/s/rzdoldu5jq6e5k1/train-label2d_widen.zip?dl=0
Some related h5 files can be downloaded here. https://www.dropbox.com/sh/p0as6r2hcglmyn7/AADToNn1k_b5s2OGeoYywtUWa?dl=0
You need to compile it to create caffe.bin