Stefan
Stefan
Hello, I usually run rvtest on a linux cluster, but want to add mac compatibility to my workflow. I downloaded the latest release of RVtests and am trying to run...
Hello, I have been playing around with the rvtests docker container for a couple of days and things have been running smoothly, thanks for the nice utility! Yesterday I attempted...
Hello I ran the following commands: ``` funannotate train -i XZ1516_ragtag_correct_scaffold_masked_nameChange.fasta -o funannotate_run/ \ --left XZ1516_S1_R1_001.fastq.gz \ --right XZ1516_S1_R2_001.fastq.gz \ --stranded RF --species "c_elegans_trsk" \ --strain XZ1516 --cpus 16 funannotate...
Hello again ;_; I ran into another issue Thanks in advance! **Are you using the latest release?** v1.8.8 **Describe the bug** A little unsure about this output error: ``` ERROR:...
Hi there. I just noticed a weird issue, which may or may not be a bug. I attached a single variant in a code block below. The workflow is pretty...
Hello there, I just incorporated your tools into my SV calling pipeline and it is working great. I did run into a panic error that was a bit confusing, but...
Hello, I am running ALE on a number of samples and am getting this error for one sample: ``` ALE: ALElike.c:1678: computeDepthStats: Assertion `tempLogLike
Hi there, I just tested this tool for combining the outputs of Delly, Manta, and TIDDIT. It seems to work great! I'm not necessarily sure this is an issue and...
Hi there, I merged four SV callers using svdb merge (delly, smoove, manta, tiddit). Then I tried running the merged VCF through vcfanno to annotate with genomic features and ran...