Shreyas Fadnavis
Shreyas Fadnavis
The DTI tutorial is not updated to the latest code. For instance the `cfa = dtifit.color_fa` should appear. Also, linearity, planarity and sphericity are not exposed in the tutorial. I...
Following up with this issue with a PR! Potential fixes: - Use `scipy.optimize.lsq_linear` and set the bounds manually or - Use `scipy.optimize.nnls` I assume `nnls` will be faster as it...
- Needs to be speeded up at the QP front for fitting procedure `cvxpy.Minimize` needs to change. Currently runs via OSQP I assume? Need to follow-up with CVXPY if `warmstart`...
Hi Everyone, I know that we do have a publications page for DIPY here: https://dipy.org/documentation/1.4.0./cite/ This page for some reason has not been updated and needs to be revamped. I...
## Description This bug occurs rarely when the number of iterations for Differential Evolution is low. Will follow-up with a PR with: - Default - `Warning` when user reduces the...
Needed to make the system work..
Patch2Self does not have a restriction on being applied to raw data. It can be applied pretty much after any point. It would be great to have it after Eddy/...
Hi, I noticed an issue in the report generated: This needs to be changed from MP-PCA denoising to "Denoising". For instance, if I use Patch2Self, it still shows MP-PCA denoising:...
Hi, I wanted to ask if it is of interest to add Patch2Self in PreQual? It is pretty simple to add to the code-base: Command line: `dipy_denoise_patch2self data.nii.gz bvals --verbose`...
Minor updates