Sebastian Franz
Sebastian Franz
Same for me in Ubuntu 20.04. Installed all required ruby dependencies
Regarding plot editing, it would also be nice to be able to change the descriptions of x/y-Axis and of the plot in general. If it's not possible to edit them...
I did a little research on this: - Best I could come up with was: [Pshtt](https://github.com/cisagov/pshtt) . The main branch seems broken atm (installing via pip, requirements or setup has...
We created a tutorial for your exact problem lately, please refer to it and let us know if you still experience problems: https://www.securecodebox.io/docs/how-tos/persistence-storage
Hello, this is kind of a late answer but likely you have to install via ```bash pip install bio-embeddings[all] ``` or ```bash pip install bio-embeddings[prottrans] ```
Can also confirm that this works under Ubuntu 22.04 with nvidia drivers 535.104.05. It only worked by downloading Battle.net manually and not via the provided bottles program list, however.
Hello and thanks for your question. :) No, biotrainer is currently not designed for fine-tuning. We plan to implement fine tuning via LoRA layers and hope to have the feature...
@heispv will work on this in the coming months.
Batches of size 1 seem also to be a problem for the torch.nn.BCEWithLogitsLoss used for protein_protein_interaction protocol.
Some input from Claude Sonnet 3.5 on the topic: > Your approach of saving intermediate results to disk is a good way to manage memory usage when dealing with large...