Ruiqi-CUB

icon company University of Colorado Boulder icon location Boulder icon location PhD student in the Department of Ecology and Evoloutionary Biology

Results 3 comments of Ruiqi-CUB

ko2name function doesn't work on some pathway numbers

I contacted KEGG and they just fixed the issu. On Fri, Mar 3, 2023 at 3:08 AM Guido Hooiveld ***@***.***> wrote: > If you look at the KEGG REST API...

No output after successfully running the pipeline

Update: I run it in the interactive docker image and output files show up. Do you happen to know what could be the possible issue: ``` docker run --rm -it...

genes in N0.tsv mismatches Single_Copy_Orthologue_Sequences and Orthogroups/Orthogroups_SingleCopyOrthologues.txt

I have found the same issue: there are more than one copy from each species in N0.tsv! Were you able to find the reasons?