Pooran Dewari

icon indicating a website link https://pooran-dewari.github.io/

icon company Roslin Institute, University of Edinburgh icon location Edinburgh, UK icon location Core Scientist at Roslin Institute, UoE. Lead method optimisation and bioinformatics pipeline developer for ChIP-seq datasets at AQUA-FAANG consortium

Results 5 comments of Pooran Dewari

Bioconda installation

Thanks @siebrenf , `mamba` works like a charm. I had given up with conda but just came across your advice, lifesaving.

Entire chromosome outputs as high signal

#### Update: Blacklist with 23 inputs, doesn't help. Tried with 23 inputs, and still gives me the entire chromosome as high signal region. Please could you suggest why Blacklist output...

Entire chromosome outputs as high signal

Thanks. I might be able to get another 8 inputs from our collaborators, so total 30+ inputs, hopefully should help. Is there a way we could restrict the size of...

Entire chromosome outputs as high signal

Thanks. I can see on IGV tracks that many regions have high signal in input files, so assuming not low signal issue. Do you think changing `int uniqueLength` from default...

Entire chromosome outputs as high signal

Thanks. Yessss, changing `int uniqueLength` to 100 worked!!!