Peer Herholz
Peer Herholz
I was wondering if we should create a mybinder instance for the [tutorial](https://github.com/nipy/mindboggle/blob/master/docs/mindboggle_tutorial.ipynb). As far as I can tell, we would only need to include the [mindboggle_input_example](https://osf.io/3xfb8/) in the `Docker`...
Hi folks, not sure if my question makes sense, but I thought I give it a try. I was wondering if a fetcher for `pre-trained model weights` could be added...
Ahoi hoi folks, I just stumbled across [nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation](nature.com/articles/s41592-020-01008-z) and thought it might be interesting wrt `nobrainer`. The GitHub is [here](https://github.com/mic-dkfz/nnunet) and...
@koudyk and I are going to start working on adding [essentia](https://essentia.upf.edu/documentation/index.html) functionality for audio and music analyses. Even though there's a [python wrapper](https://essentia.upf.edu/documentation/essentia_python_tutorial.html), the underlying [installation and requirements](https://essentia.upf.edu/documentation/installing.html) seem to...
While going through the listed resources, I thought about a category/section that could be added: workshops. This would be complete workshops focusing open neuroscience. For example (sorry for the biased...
The alignment and formatting of the `tabs` under `Settings` in a given user's profile appears to be somewhat off: Should hopefully be an easy `html` fix.
The sufficient generation of html summary reports currently depends on the [preproc_anat](https://github.com/miykael/fmriflows/blob/master/notebooks/01_preproc_anat.ipynb) workflow and is absent in case only the [preproc_worklfow](https://github.com/miykael/fmriflows/blob/master/notebooks/02_preproc_func.ipynb) or any other workflow is run. We should change...
This `PR` introduces an initial draft of `parcellation_fragmenter images` build via [neurodocker](https://github.com/ReproNim/neurodocker).
We could add a small Docker/Singularity image to ease up installation, usage and tests. This would include setting up images using [Neurodocker](https://github.com/kaczmarj/neurodocker) and write a small function that runs parcellation...
Hey folks, I was just wondering, if a small function to transform the parcels from surface to volume would be nice and useful, as a lot of people mainly work...