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Questions on batch removal tutorial

2

Hi, I'm running the batch removal tutorial provided in: [https://scgen.readthedocs.io/en/latest/tutorials/scgen_batch_removal.html](url) My interest is the feature of you're software of producing a corrected expression matrix after the batch removal. I need...

Hi, I have already faced two problem with the pip installation, the first is the -fopenmp --> solved as suggested in other closed issues by the relatives conda installation the...

Problem with Convert() from h5ad to h5seurat

2

Hi, I'm trying to convert the resulting corrected_adata coming from this tutorial [https://scgen.readthedocs.io/en/latest/tutorials/scgen_batch_removal.html](url) saved as scgenres.h5ad to the .h5seurat format, in order to upload it in rstudio with Seurat. I...