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Hi~ Thanks for your quick reply. I am running Aspergillus fumigatus. I have around 100 samples, and they generate very similar mitogenomes with version 3.7 except for several that have...

And another question, sometimes when I run the same sample with different (even the same) seed and reference, the results might be different. Thant's normal, right? After my first running...

Hi~ The extended log file and the circularized fasta file have been uploaded in the attached zip file. Thanks~ [3.8.2test.zip](https://github.com/ndierckx/NOVOPlasty/files/4424192/3.8.2test.zip)

Hi, Thanks for the clarification. The extended log file for assembly has been attached. [log_extended_031920_69.txt](https://github.com/ndierckx/NOVOPlasty/files/4424748/log_extended_031920_69.txt)

Hi~ Please see the attached results. How could I determine the majority allele by the way? Thanks~ [3.8.2test2.zip](https://github.com/ndierckx/NOVOPlasty/files/4430522/3.8.2test2.zip)

> Hi~ > Please see the attached results. How could I determine the majority allele by the way? > Thanks~ > [3.8.2test2.zip](https://github.com/ndierckx/NOVOPlasty/files/4430522/3.8.2test2.zip) The results show more assemblies this time. Does...

Hi~ Thanks for the exciting news and your help! Since all the SNPs have around 30%, could NOVOPlasty assemble the alternative whole mitogenome as well? Could you please indicate which...