Oieswarya
Yes I am indeed running these on PBS nodes. I looked at the **unitigging/1-overlapper/** folder and it contains 88 log files of the manner 'utgovl_Nibea.o166456-88' and it contains: ``` Found...
Hi @lcoombe, yes strangely I have not changed anything and also goldrush-path --help gives me all the information from the help page. I am using the job script that I...
@lcoombe I wanted to update you. I have run the command separately from goldrush_immediate_files and this is the log file that generated: Using preset spaced seed with: span: 22 weight:...
@lcoombe shall I run this command now? goldrush run reads=Human_nonACTG_fq G=3120e6 track_time=1 m=10000 --debug
I am still getting the same error: GNU Make 4.3 Built for x86_64-conda-linux-gnu Copyright (C) 1988-2020 Free Software Foundation, Inc. License GPLv3+: GNU GPL version 3 or later This is...
Yes I am running both the commands from the same environment where I installed my goldrush. I will try to upload the file but unsure if I can do that...
@lcoombe I apologize for not getting back to this sooner. I got busy with some other work. But I tested with an input which previously ran successfully and I am...
Thank for the prompt reply @lcoombe. I will do that and will keep you updated.