No2Ross

Barcodes displayed in github page text not found in souporcell test output

2

Hi there. I've just ran the souporcell test case to make sure everything was functioning as it should, but I found that the barcodes that are listed as the output...

Hi. We've been running cyclum on some data and got some weird distrubtion across the round pseudotime plot [Log2022_cyclum_fig_all 1.pdf](https://github.com/KChen-lab/Cyclum/files/14011470/Log2022_cyclum_fig_all.1.pdf) We decided to test our version of cyclum on the...

Incompatible shapes for the elbo_avg function brain sagitall visium data

1

Hi There. I wanted to use your method to analyse some visium data I had, but to make sure I could get it working, I ran it on the sagitall...

Hi. I've been trying to test out a trajectory alignment method using dyngen datasets with different kinetics and i wanted to look at the correlation of the cells from the...

Hi, I am analysing Aurora data and have put the compensated unmixed data (from three batches) through cytoNorm to correct for the batch effects. The batch corrected expression values for...