Etienne JODRY

Results 11 comments of Etienne JODRY

Hello @MaximilianLombardo So I went on with frontporting the feature, with way more success than I initially expected to be honest :) You may find the code at #2656 It...

Hello @MaximilianLombardo , ### Update As I mentioned above, the pull request now also features `test/unit/test_cxg_dataset.py`, which runs fine but fails on creating a `lossy` array (i.e. `test_tdb_bug_lossy`). I can...

Hello @z5ouyang , Sure, half the point was to make it visible in case someone is looking for such a Dockerfile. Best,

Hi @rohitrrj, > @Neah-Ko Thanks for sharing the Dockerfile! Looks great and seems a lot of effort kudos. However it looks like the build fails while installing the "rpy2" dependancy....

> Hi @Neah-Ko > > Thank you so much for all your work on this, I was just wondering if in this docker container you can build cellxgene using the...

> hi, thanks a lot for sharing. this looks great, however, I'm unable to build the docker image (on ubuntu 22) even including the additional lines suggested by @rohitrrj. I'm...

HI @bobermayer, Thanks for your input. Interestingly, the built also failed with missing `crypt.h` on my machine. I guessed something somewhere changed since I've designed the Dockerfile. I have added...

> Using `cargo install --locked --path=.` worked for me [#78 (comment)](https://github.com/mtshiba/pylyzer/issues/78#issuecomment-2022917309) Thanks @aarnros the installation did proceed that way. However, at first glance it doesn't seem that pylyzer (or the...

I am having issues with time taken by analyzing big dataset memory after contributing for #1230 On use it seems that `AnnData` still loads a good chunk of the file...

Hi @ilan-gold, thanks for your answer. I've ran my profiling test on your code. 1. checkout on the pr code then 2. use it to load using the new feature;...