Nadine Bestard
Nadine Bestard
I also noticed this v2 feline that did not match with the rest of the lesson. I presonally edited the first file manually in front of the students, as later...
If someone is looking for a workaround for this, waiting for the enhancement, here I suggest one that worked for me: ``` # save resolutions of interest with labels in...
I suggeted another image in the pull request #309
I was going to open an issue addressing a similar problem: Very often we do not get the time to end the lesson, and then we can not get to...
@matasV99 > Hi, > > After modifying the code like this: "obj
When I tried to add kmeans_init_nstart argument I got the same problem as @madisonlayfield https://github.com/immunogenomics/harmony/issues/25#issuecomment-612697181. Creating a Seurat object from my matrix, metadata and PCA to be able to use...
Thank you! That makes lots of sense, sorry I missed it in the documentation. I had a bit of a play with it, and I leave here the code I...
As an additional comment to this feature request, for bins in overlapping cells*, it would be nice to use their GEX to refine the assignment to one cell or another.
yes, this is what I meant! Sorry my sentence did not make sense, I'm glad you got me haha
Further discussed in https://github.com/scverse/spatialdata-io/issues/310