NJU-BIO-Infor

Hi, when I use bowtie2 to perform CUT&Tag alignment. I set -X 700 and filter the reads whose mapq700 in bam file. I wonder why I get this result?

object 'GO2ONT' not found

5

Hi, when I use ```enrichGO``` to perform GO enrichment analysis, I had a bug: ```Error in get("GO2ONT", envir = GO_DATA) : object 'GO2ONT' not found``` and this bug I think...

Difference between the genome browser view of BAM produced by STAR and the result of Salmon

1

Hi, such a fantastic RNA-seq analyze tool Salmon! Recently, I used Salmon to analyze transcript level expression and the information of my analyze tool: - Salmon: v1.6.0 (install from bioconda)...

Hi, a good tools for scRNA-seq data analysis! I wonder that whether we can get ROGUE value for multi cell clusters from a same sample via a simple function like...

When I run: ``` hicBuildMatrix -s ../../2.map/r1.sam ../../2.map/r2.sam -o hic_matrix.h5 --binSize 10000 --QCfolder QC --doTestRun --outBam TestRun.bam -rs DpnII.bed HinfI.bed -seq GATC GA.TC --danglingSequence GATC A.T ``` it throw an...