LianLin

Has this request been solved?

windows may not work, see https://github.com/nanoporetech/fast-ctc-decode/ or https://github.com/N-damo/CTCBeamSearch

A nanopore can hold k nucleotides (k-mer) simultaneously. For example, k equals 5 for the pore version R9.4. Thus, the current changes indicate the k-mers that pass through the nanopores....

everything is amazing. In the supervised machine learning, back to the very beginning, people how to know raw signal correspond to a real sequence.

I add this line(if len(labels) == 0:return ) in deeplexicon_multi.py, it works for me  btw， in multiprocess, I suggest it should add '\n' in 'print("{}\t{}\t{}\t{}\t{}\n".format(fast5s[readID], readID, barcode_out[out], cm, "\t".join(["{:.5f}".format(prob[i])...