Mostafa Y. Abdel-Glil
Mostafa Y. Abdel-Glil
Hi, is `polca.sh` (https://github.com/alekseyzimin/masurca#polca) script included in the masurca conda environment (v3.4.2)? Thanks
Hey, Thanks for developing ariba, I am using ariba for MLST calling. My scheme is not available online so I've created a custom scheme (issue #185 ). I am interested...
Hello, thanks for this great tool. Just a question: I wonder how to select the appropriate reference for a set of (diverse) genomes. When I run the referenceseeker in this...
### Prerequisites - [ ] make sure you're are using the latest version by `csvtk version` - [ ] read the [usage](http://bioinf.shenwei.me/csvtk/usage/) ### Describe your issue Hi, to suppress warning...
### Prerequisites - [ ] make sure you're are using the latest version by `seqkit version` - [ ] read the [usage](http://bioinf.shenwei.me/seqkit/usage/) ### Describe your issue Hi, Would `seqkit` may...
### Proposal Hi, would you be willing to add support exporting markdown files in reStructuredText (.rst) format. Thanks in advance, ### Other information
This is not really an issue, but may be a feature request. I see that chewbbaca allele call takes as input the directory containing the assemblies / file of paths...
Hi, I have the sequence reads of some strains (illumina reads). I want to map these sequences to certain genes (not the whole genome of the reference) and to determine...
Hi, could be any tips to run the RedDog pipeline fast? takes longtime even on only 2 samples. Do I understand it correctly that the processing of each sample include...
Hi, I am working on a sequencing run that was created with Gridion. The basecalling option was enabled in MinKNOW during sequencing. Recently I tried to re-basecall the run using...