MitoSri
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MitoSri
Hi! @MooseyGoosey did you find any solution? I have the same issue. I suspect that Plink is applying quality filter criteria.
Hello @gizembydmr . I ran into similar issue. The work around is to start by extracting raw count matrix from seurat object> normalize>runPCA/NMF>do ScGSEA as explained in the gficf package...