MichelMoser
MichelMoser
## Problem description When trying to reorder some manipulated gff files where the features got mixed up, i bump repeatetly into warning messages and gt stops: message: ``` gt gff3:...
Hi, I just ran a falcon assembly on a large plant genome (1.4 Gb) using 50 smrtcells. I kept the .las files and was wondering if i could use them...
Hi, I am excited to test CONSENT with a nanopore dataset of about 60x of a 600Mb genome. Its about 2.8 mio reads (41 Gb total length). Unfortunately, all-vs-all alignments...
Dear @mchowdh200 , I would like to test your tool to filter SV calls using long-read alignments. As i understood, your model was trained with short-read alignments, correct? Do you...
Dear Haibao, I try to compute dotplots with new assemblies anchored by allmaps of two closely related species. Both assembly annotation show about 35'000 gene models. But when calculating orthology...
Hello, I installed alphamap via pip in a separate conda environment. When i try to run alphamap, i run into an import error from Jinja2 package: ``` (alphamap) $ alphamap...
Dear @erblast, I really enjoy your packages and am currently trying to extend some hover options (which you already started).  As i am still new to plotly, i am...
Hello, I am trying to use bibtex package to mine a bibtex file for certain keywords. When trying the read.bib method, i get following error: ``` bib
Hi, I run into an error in the virtual_digest rule. Looks like Bio.Alphabet was dropped after biopython 1.78 but required by the rule. Could you provide a fix for it?...
Hi, I just started using ggbio in order to plot gene tracks along with ggplots. When i try to add variant information as a new track i have problems creating...