MengjunWu

Isoseq collapse filtering out criteria

1

Hi, I have some problems with isoseq collapse. While most of my reads (90%) are mapped, almost half of them are filtered out after isoseq collpase. I was wondering how...

dbr.per1K and equivalent dbr gave different number of doublets removed

5

Hi, I am running scDblFinder using dbr.per1K (0.004) as well as manually calculated dbr (ncol(sre)/1000 * 0.004), they two should be equivalent from my understanding, however they resulted in different...