MayaTalukdar

icon indicating a website link https://www.linkedin.com/in/maya-talukdar/ icon indicating an email [email protected]

icon company Harvard Medical School/MIT icon location Boston, MA icon location md-phd student @harvard @mit @hst tackling human genetics problems, a single-cell at a time

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Issue Running CONICSMat Tutorial Due To Deprecated SCRAN Function

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Hello, I am working through the SmartSeq2 scRNA seq of Oligodendroglioma tutorial for CONICSMat and running into an issue with this part: vg=detectVarGenes(suva_expr,500) ts=calculateTsne(suva_expr,vg) plotTsneGene(ts,suva_expr,c("MBP","CSF1R","ALDOC","OLIG1")) It appears that detectVarGenes calls...