Andrea Argentini

Hi, Thank you for let me know this compatibility problems with the current version version of pandas. I have fixed the docker file, but not tested yet. let know if...

Hi, the PTM setting is really important for the filtering of the mathe matched peptides. Unfortunatly, there is a not standard way to parse the modification because every search engines...

> { > "C": {"deltaChem":[3,2,1,1],"desc":"Carboxyamidomethylation C unimod:4"}, > "[15.99]": {"deltaChem":[0,0,0,1],"desc":"oxidation oxidation unimod:35" }} This shoudl works fine, but he problem is that moFF also expects also an openend tag for...

> Hmm I'm a little confused about the need for "" the maxquant settings example doesn't have those. Are you saying I can use the ptm_settings described above, but I...

Hi, Sorry for my late reply, at moment I am working outside academia and I follow partially moFF in my free time. A couple of questions :² Do you ran...

Hi Bjoen, Actually the integration of moFF with the peptides shaker output is supported only in GUI version , where from the cpsx file we generate the tab file for...

Hi All, > Note that at the moment you will manually have to rename some of the column headers to match the headers required by moFF: ``` Sequence > peptide...

Hi @bgruening , Sorry for my late replay. From my side this is the situation: in moFF.all I have added two other options that allow the user to specify the...

The latest version of moFF can takes in input PS exported file using the PSM default exporter. I have tested this new function in windows but not completely in Linux...

The next big update planned is the integration with the new Thermo multi-platform library for the raw file. I expect that this will happen in two/three weeks. Maybe we can...