MatthieuBeukers
MatthieuBeukers
With Sambamba v0.7.0, running the following command: ``` sambamba depth region -L /path/to/bedfile.bed -F 'mapping_quality >= 20 and not duplicate and not failed_quality_control and not secondary_alignment' -o /path/to/bamfile.bam_coverage -t 6...
End-to-end tests are not executed by Travis CI, please execute manually: - [ ] `APPTAINER_BIND=$PWD bash test/test.sh` passes - [ ] Updated documentation
Dear deepvariant team, We ran both DeepTrio 1.8.0 en 1.9.0 on GIAB data as well as own produced data we both locally have available. In the first case running DeepTrio...
…decision tree Before submitting this PR, please make sure: - [ ] You have updated documentation for new/updated/removed features - [ ] You have added tests - [ ] You...