MatsuSui

I have tried harmony for batch effect correction for my single-cell RNA-seq data to intergrate tumor and normal tissues, but when I used default parameter values, I found one problem...

terminate called after throwing an instance of 'std::invalid_argument' what(): [bioparser::SamParser] error: invalid file format

1

Hi, I have a problem with Racon. Firstly, I got the .paf with minimap2. minimap2 -t 35 /data3/suisn/nanopore/bp/miniasm/miniasm.fasta /data3/suisn/nanopore/bp/filter/NanoFilt/nanofilt_trimmed.fastq > racon_round0.paf Then, I used the folllowing command to run Racon...