Yi Zhang

Hi, I recently have a problem when reading in LOOM files produced by the loompy fromfq command: ldat

LumpySV failed on certain cases

1

We tried to solve this by compiling the newest lumpy-sv version from github and directing it to speedseq but still not working. Some data are processed without any problem but...

Dump with empty output

2

Hi, We try to list all possible kmers from a pair of fastq files using: ``` kmc \ -k31 -m128 -ci1 -cs4294967295 -cx1e13 -t36 \ -jOutput.json \ @files.lst \ test.kmer.output...