MD Sharma

Hi Folks, we amended the runtime options in refine_alignments.pl for the mummer step to use the default minmatch of 20 (instead of the 10 thats hardcoded into the script) but...

We have repeated this analysis with v3.2.4 and 3.2.6 and the outcome remains unaltered. Trying to compile an older / earlier version as well. @alekseyzimin your views will be much...

> > Hello, Not yet. 5.8S/5S are showing many shared partial sequences (e.g. 5.8S and 28S in the same sequence), and we are investigating the reasoning prior to running final...

Hi @biofuture, the singularity version of teh pipeline seems to be executing the final R commands outside of the singularity environment for some reason. Please could you have a look...