LucyYang
LucyYang
I have the same issue that was reported in Seurat: https://github.com/satijalab/seurat/issues/7295, so just want to follow a workaround.
About using compareCluster result to plot the treeplot, I cannot repeat the result. And here is the error that looks like: ``` > treeplot(test.out, showCategory = 10, geneClusterPanel= "pie", nWords=0,...
@guidohooiveld So grateful for your reply! I updated all the packages and R version according to your suggestion and run the codes you provided. But still got the same error...
@guidohooiveld Thanks so much for all the replies, it really works! Best wishes~
When I remove `AUCell`, things work. So I think is the problem of AUCell ``` result.deg = irGSEA.integrate(object = object, group.by = resolution, method = c("UCell", "singscore")) Calculate differential gene...
Do you plan to add mouse immune model, but not convert human immune model into mouse one?
I have the same problem. Moreover, using the F12 shortcut key doesn't work, and the "go to definition" option doesn't appear when I right - click the mouse.
I know why the jump is invalid. In the.vscode\settings.json file in the project folder, the `"python.languageServer": "None"` must be deleted, and then all interpretations and jumps will be restored.