Kudzai-H
Kudzai-H
Thank you very much. Would you then recommend adding them back again as they are after decontam or pruning the same contaminant taxa from them and then adding them back...
Thank you. I will do just that. I apologise as I have one more question. I ran the command {hist(contamdf.freq$p, n=100)}, in order to help me decide on the threshold...
Apologies for that. I have attached them here.   Hopefully you can see them now.
Sorry again, the first one with a frequency scale going up to 30 is right and the second one with a frequency scale reaching 15 is left.
Thank you very much for this advice!