Ekaterina Sakharova
Ekaterina Sakharova
Hi @chklovski, Thank you for your answer! I have some bins from the same Run annotated as eukaryotic MAG. You assumption might be correct. I will deeply look into this....
Hello @paulzierep, Thank you for your report! Some folders were compressed on FTP. I fixed it and changed command for ribosomal models. README was updated. MGnify team kindly ask **not...
@mberacochea Martin, it is possible to use several types for inputs For example, ``` type: [ string, File ] ``` I think it will solve our problem without any significant...
I'm trying to fix that in **docker-databases-paths-fix** branch but I bumped into similar issue like in https://github.com/common-workflow-language/cwltool/issues/1285
``` Apr-15 14:57:15.371 [main] DEBUG nextflow.cli.Launcher - $> nextflow run demo.nf -with-wave Apr-15 14:57:15.571 [main] DEBUG nextflow.cli.CmdRun - N E X T F L O W ~ version 24.03.0-edge Apr-15...
[logs.tar.gz](https://github.com/seqeralabs/wave-showcase/files/14980370/logs.tar.gz)
@jeanrjc Could you merge that fix into master and include to new release, please? We (MGnify) are using you tool in our [pipeline](https://github.com/EBI-Metagenomics/mobilome-annotation-pipeline) that @Ales-ibt is supporting. We had to...
Hi, `--list` option would be removed in comming release. Multiple run would be supported using samplesheet and gathering samples should not be a problem anymore
@hoelzer Hi Martin, I have started looking into that issue trying to understand what we should do with it. We have adjusted `assign.py` script a bit but have left decision...
Fixed in #135