JHu

Results 3 comments of JHu

kmeans centers not distinct

When I check the code, I notice that there may be bugs in the reduceDimension function: I find that the bug is from: ddrtree_res

Data format for bulk RNA-seq with 10X UMI data as reference: counts, TPM or PFKM?

should bulk TPM or FPKM data be log2 transformed?

How to perform perturbation prediction with 10X tissue dataset?

Thanks for your response, Indeed, I want to predict gene expression changes following the in silico knockout of TCF7 in CD8+ T cells from lung cancer tissue. Could you kindly...