JoseLopezArcondo

Hello! I am running and setting funannotate for the first time. I could run "clean" and "sort" steps. I had already a masked version of the genomes, so I avoided...

allright, I can try that. I removed augustus package in funannotate but now it does not work. I guess it removed more stuff in the process. Is there a way...

Thanks a lot. Yes, I think this is working. I created a new mamba using augustus 3.4 and seems to be running well.

Here another issue I found while running "predict" "error: [Errno 2] No such file or directory: '/home/jose/miniconda3/envs/funannotate/opt/evidencemodeler-2.1.0/evidence_modeler.pl'" Is it some configuration issue? Current content in that folder is: EVidenceModeler EvmUtils...

thanks, I think that solves it. Now I have this issue as well, these types of errors appear all the time.. "Error: In sequence scaffold_1_45659-49698: One CDS exon does not...

well, in the first comment I think she is reffering to the line containing "augustus --species=anidulans" the output gives. It happens to me and everyone else in our lab too....

To avoid this error, I modified script "annotate_bins.py" (you have to find it in your "miniconda3/envs/DRAM/" folder), and replaced this piece, using nano, with the corrected code that is here...