Jihed Chouaref

icon location The Netherlands icon location I am a French 🇫🇷 living in the Netherlands 🇳🇱. I am bioinformatician interested in machine learning methods and eager to discover/use new technologies!

Results 5 issues of Jihed Chouaref

Quick question on Step12 to step13

1 comment

Hi! Thanks a lot for this pipeline, it's well documented and so far I have been using it without any issue. I have a small question on step 12. At...

BUG: Workflow not running

20 comment

Hi, I have been trying to run the chip-seq workflow of seq2science. It starts but stops when 7% of the jobs are done. ``` seq2science --version seq2science: v0.5.1 ``` **To...

bug

BAM file per single cell or bulk?

Hi @yuifu, The tool you developed seems very nice and I would like to use it for on my dataset. Before starting I would like to check something with you...

Can't load sce data

30 comment

Hi, I am new to Ouija but quite excite about using it. I have got my Seurat object transformed into a singleCellExperiment object. Unfortunately Ouija doesn't seem to see like...

Most file are empty after split

Hi! Thank you for developing this tools. I would like to use the function split in order to generate a bam file per single cell. The structure of my bam...