Jens-Uwe Ulrich
Jens-Uwe Ulrich
Hi @smehringer The paper describing XOR filters can be found [here](https://arxiv.org/abs/1912.08258). I'm open for discussions on implementing them as an interleaved counterpart to IBFs if this would be interesting for...
Thanks for your answer @eseiler I have some applications in mind where all elements are known at the time of construction, e.g. trying to answer if a sequenced read is...
Hi @smehringer that was my plan as well. Would be a mess to implement and not share it with the whole seqan community. Thanks for offering your help. I will...
Hi @smehringer & @eseiler I finished a first naive implementation of the interleaved XOR filter (IXF) and pushed it to my forked seqan3 repo (https://github.com/JensUweUlrich/seqan3). You can have a glance...
> For a fixed fingerprint, does the FPR vary based on your data and number of bins or is it always 0.0039? (S.t. I could increase speed by allowing a...
To be honest, I did not invest too much time in code optimization. I'm sure you will find some places in the code where you can tweak performance. But theoretically,...
Well... that's not exactly what I meant. This assumes, that you already downloaded seqan to some place in your filesystem. There is a possibility to define external projects in CMake...
Ok. That was my idea as well. I will try and tell you how it could work.
Okay. I figured out how to do it. The directory structure of my app is like the one described in the tutorial with a _build_ and _src_ directory. Within _src_...
Can be closed from my side.