Jing Yao

icon company SYSU icon location GuangZhou, China icon location Bioinformatics in Sun Yat-Sen University

Results 2 issues of Jing Yao

max_log_likelihoods, max_log_likelihoods_index = log_likelihoods.max(dim=0) IndexError: max(): Expected reduction dim 0 to have non-zero size.

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python3 ./YAMDA/YAMDA-0.1/run_em.py -f 0.1 -r -e -w 20 -maxs 20000 -i ./raw_data/positive_sequence/R5_LUNG_M_2_positive_seq_uniq_name.fa -j ./raw_data/negtive_sequence/R5_LUNG_M_2_negtive_seq_uniq_name_paired.fa -oc ./motif_find/R5_output/LUNG Loading sequences from FASTA Searching positive sequences: 100%|███████████████████████████████████████████████████████████████████| 9/9 [00:02

Nanopore cDNA PCR data mapping

Hi, Recently, I am doing some analysis of Nanopore cDNA PCR data. When I processed NGS data, I used Picard to remove duplicates, so I also used picard to process...