Jakob Willforss
Jakob Willforss
Hi! Also struggling with this one. I found some useful hints here! I ended up doing a Tidyverse approach using the `filter_at` function. After calling the UpSetR::fromList() I obtain a...
@sfd99 Thank you for your comment! I think I made a typo. It should be an additional end parenthesis i.e. '"C"))' instead of '"C")' . This one runs for me...
Hi! If I understand you correctly you want rows where B and C exclusively are 1. For this I did a separate filtering step. ``` d %>% rownames_to_column("rowid") %>% filter_at(vars(c("A",...
Hi! I am trying out running this patch PR on the dataset I have been running before (i.e. GIAB on our server). I run into errors, trying to see whether...
Quick update. I am running into more downstream issues, but I think these are on my side. I will continue working through the GIAB run and raise any issues I...
Any updates on this feature? Starting from bam-files would be extremely useful.
> Funnily enough I've been working on something related to this using the d4 crate, though I hadn't considered implementing it within d4tools show. Unfortunately I haven't had time lately...
Nice @cademirch , I'll take a look during the day!
I am trying this out. It looks great!! Our previous way of processing 74 intervals with three thresholds took ~15 seconds. With your function it takes only 0.5s. The results...
It would be great to get this one into d4tools in some way actually. I looked at the diff, and the code looks well organized, but I am unfortunately not...