Josh Schoenbachler

The R version required in the DESCRIPTION file is R 3.2.0 - https://github.com/r-lib/vdiffr/blob/fc03e91cccac04baa875063513b630d80c02e197/DESCRIPTION#L25 Meanwhile, the `expect_doppleganger` function skips test evaluation if it is on any version before R 4.1.0 -...

SALMON_TX2GENE failing when skip_alignment is true and pseudo_aligner is salmon

9

## Check Documentation I have checked the following places for your error: - [X] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting) - [X] [nf-core/rnaseq pipeline documentation](https://nf-co.re/rnaseq/usage) ## Description of the bug When using the...

When supplying date values outside of the accepted date range of ClickHouse date columns (1970-01-01 to 2105: https://clickhouse.tech/docs/en/sql-reference/data-types/date/) RClickhouse overflows/underflows the date instead of setting to the minimum or maximum...

Export flatten_lints or have lint_files function that accepts multiple files

1

I was wondering if there was any possibility that one of the two things in the title can happen. As it is, if I want to lint multiple files that...

openssl not found in Ubuntu and Fedora builds.

13

Other users and I have noted some issues with the linux rhub platforms as of late, see this issue: https://github.com/r-hub/rhub/issues/508 I'm not sure of the exact details for the other...

How to tell if you are already within %dopar% loop?

2

Just seeing if there is a sure fire way to determine if you are already within a foreach loop using `%dopar%`? As it is currently, I have a workaround function...