Jaspreet Singh Saini

Visualization of eggnog outputs?

1

Thank you for the tool. Is there a simple way to visualize eggnog outputs? Any already prepared script? Thanks.

Only one category appearing with geom_fruit

8

Hi, thank you for this amazing tool. I would like to put multiple categories/sample on the x-axis. However, only one is appearing for now. My purpose is to put geom_tile...

Salmon in metagenomics mode (--meta) yield gene per million reads or per sample?

1

Hello, I am quantifying the abundance of genes in metagenomics data using paired-end reads (R1 and R2). I used --meta flag according to the salmon manual and provided R1 and...

CoverM to assess genomes relative proportion in Metatranscriptomics data?

3

Hi, thank you for the wonderful tool. Can coverM be used for assessing genomes or MAGs proportion in metatranscriptomics reads? I guess it might be the normalization of reads prior...