JB91451

Hi Vadim, Thank you for the answer - I guess --report-lib-info was exactly the option I was looking for. I agree that for most cases aggregation done by DIA-NN is...

Hi Ralf, No, the Windows server has a gui and I connect via the remote-desktop tool. The output from pip freeze is as follows: ``` E:\JB>E:\JB\ms2pip\venv\Scripts\activate.bat Parameterformat falsch - 437....

Hi Ralf, Thanks for coming back to that issue. We have deleted that server (including my test files) meanwhile and use a local [koina-server](https://github.com/wilhelm-lab/koina) with the ms2pip models for those...

Dear Lee, Thank you for the quick reply. I would agree that the better approach is likely the predicted (subset)library but the idea behind the project is exactly to compare...

Hi Vadim, Thank you for your reply. I did it the other way around: Exporting existing libraries from .sptxt to DIA-NNs .tsv format and than replaced/filled the column 'Tr_recalibrated' with...

I think, Python 3.12 is meanwhile supported. However support for Python 3.13 still lacks behind.