Ithinky

Hi, Thanks for your great tool! ### When I set -minPrivateClusterSize 120 -minClusterSize 20 -cp, only minClusterSize works and all the clusters are larger than 20. Howerver, the -minPrivateClusterSize seems...

Thank you for your useful tool ! I used CP as input and found 2 valid trees, but I have trouble in visualization.The log is as follows. Can you help...

x509: certificate has expired or is not yet valid when using singularity search ubuntu

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**Version of Singularity** What version of Singularity are you using? Run: ``` $ singularity --version ``` version is 3.8.6 **Describe the bug** A clear and concise description of what the...

Can't save transformation result

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Hi, Thanks for your great work in Spatial omics filed! I used SpatialData to integrate two images and following the tutorial "Use landmark annotations to align multiple -omics layers". Everything...

[bug report] CNNScoreVariants can't continue

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## Bug Report I run the CNNScoreVariants as tutorial, but it can't continue and always stuck as the following picture, and the programme isn't stop by any error. By the...