Idavr

Hi there! I kept stumbling upon units that had a huge peak at 0 in the Correlogram, but nothing showing when examining the ISI view. However, after a it I...

Assertion Error when opening spike sorted file

43

Hi, I recently ran a recording through Kilosort2.5, where it reported to find spikes and good units (if few), but when I try to open it up in phy I...

[Bug] Ineffective alpha-level for SPADE

12

Hello there! I am trying to identify patterns in my neural recordings I am now testing SPADE, which initially seems very promising for what we want to do, but I...

Invalid annotation error when trying to read .nwb file

3

Greetings everyone! I hope someone here can help with solving a very basic issue. Currently I am trying to read a .nwb file using NWBIO like this: from pynwb import...

[Error] List index out of range error during CAD (cell assembly detection) during agglomeration of neuron(s)

3

**Describe the bug** During some analysis runs using the cell assembly detection (CAD) method on recording segments with 758 neurons I get this particular error: ``` Initializing the dictionaries... actual...

ModuleNotFoundError: No module named 'numpy._core' on Ubuntu 22.04

4

I have downloaded phy according to all instructions (tried both directly with git and by environment.yml files) and gone over multiple tweaks on other opened and closed issues (like installing...